Pumpkin Muffin Granola Cups

Featured in: Bite-Size Snacks

Enjoy the cozy combination of pumpkin and autumn spices in these muffin-style granola cups. With a nutty oat base and a creamy pumpkin filling, they're baked until golden and perfect as an on-the-go breakfast or nourishing snack. Easily prepared using pantry staples, their crunchy exterior pairs beautifully with the soft spiced center. Optional chocolate chips and seeds add extra flavor and crunch. Naturally sweetened and adaptable for different dietary needs, these are a wholesome way to savor the season's flavors. Store conveniently for a quick energizing bite throughout the week.

Updated on Mon, 27 Oct 2025 13:57:00 GMT
Delicious pumpkin muffin granola cups topped with mini chocolate chips and pumpkin seeds.  Save to Pinterest
Delicious pumpkin muffin granola cups topped with mini chocolate chips and pumpkin seeds. | funcockts.com

A delightful fusion of spiced pumpkin muffins and crunchy granola, these cups make a wholesome breakfast or snack, perfectly portable and full of autumn flavor.

Last fall, I packed these Pumpkin Muffin Granola Cups for a family hike, and they disappeared before we even reached the first overlook. Their texture is a hit with kids and grownups alike.

Ingredients

  • Granola Base: 2 cups old-fashioned rolled oats, 1/2 cup chopped pecans or walnuts, 1/4 cup pure maple syrup, 1/4 cup coconut oil (melted), 1/2 teaspoon ground cinnamon, 1/4 teaspoon salt
  • Pumpkin Muffin Filling: 1 cup pure pumpkin puree, 1 large egg, 1/4 cup brown sugar (packed), 1/4 cup plain Greek yogurt, 1 teaspoon vanilla extract, 1/2 teaspoon ground cinnamon, 1/4 teaspoon ground nutmeg, 1/4 teaspoon ground ginger, 1/4 teaspoon ground cloves, 1/2 teaspoon baking powder, 1/4 teaspoon baking soda, 1/8 teaspoon salt
  • Optional Toppings: 2 tablespoons mini chocolate chips, 2 tablespoons pumpkin seeds

Instructions

Prep Muffin Tin:
Preheat oven to 350°F (175°C). Grease a 12-cup muffin tin or line with silicone liners.
Mix Granola Base:
In a medium bowl, mix oats, nuts, maple syrup, melted coconut oil, cinnamon, and salt until evenly coated.
Form Cups:
Divide the granola mixture evenly among the muffin cups and press firmly into the bottoms and up the sides to form a cup shape.
Bake Granola Cups:
Bake granola cups for 10 minutes. Remove from oven and gently press centers again to maintain cup shape.
Prepare Pumpkin Filling:
Meanwhile, in another bowl, whisk pumpkin puree, egg, brown sugar, yogurt, vanilla, spices, baking powder, baking soda, and salt until smooth.
Fill Cups:
Spoon about 2 tablespoons of pumpkin mixture into each pre-baked granola cup.
Add Toppings:
Sprinkle with optional chocolate chips or pumpkin seeds.
Final Bake:
Bake for an additional 10–12 minutes, until filling is set and edges are golden brown.
Cool and Enjoy:
Cool in the tin for 10 minutes, then carefully remove and cool completely on a wire rack.
Warm, spiced pumpkin muffin granola cups, perfect for a cozy autumn breakfast.  Save to Pinterest
Warm, spiced pumpkin muffin granola cups, perfect for a cozy autumn breakfast. | funcockts.com

My kids love helping press the granola into the muffin tin and picking which toppings go on their cups. These have become a fall tradition in our house.

Required Tools

12-cup muffin tin, mixing bowls, whisk, measuring cups and spoons, rubber spatula

Allergen Information

Contains tree nuts (if using pecans or walnuts), egg, and dairy (Greek yogurt). For nut-free, omit nuts and use seeds. Always check ingredient labels for potential allergens.

Nutritional Information

Calories: 160, Total Fat: 7 g, Carbohydrates: 22 g, Protein: 3 g per cup

Crispy granola cups filled with creamy pumpkin filling and aromatic spices, inviting bites. Save to Pinterest
Crispy granola cups filled with creamy pumpkin filling and aromatic spices, inviting bites. | funcockts.com

Serve these Pumpkin Muffin Granola Cups fresh for breakfast or pack them to go as a delicious autumn treat.

Recipe Questions & Answers

Can I use canned pumpkin for the filling?

Yes, canned pure pumpkin works well and gives a consistent texture and authentic pumpkin flavor.

What are alternatives to nuts in the granola base?

Replace nuts with seeds such as sunflower or pumpkin seeds for a nut-free version.

How should I store the granola cups for freshness?

Store them in an airtight container at room temperature for up to 3 days or refrigerate for up to a week.

Can I make the cups ahead of time?

Yes, prepare and bake in advance; they maintain their texture well for several days when properly stored.

Are there alternatives to maple syrup in the base?

Honey or agave syrup both work well as sweeteners instead of maple syrup in the granola base.

How do I get perfect cup shapes every time?

Firmly press the granola mixture into the muffin tin and gently re-press after par-baking to ensure defined sides.

Pumpkin Muffin Granola Cups

Pumpkin and granola combine in wholesome cups perfect for breakfast or snacking, bursting with cozy fall flavors.

Prep Duration
15 minutes
Cook Duration
20 minutes
Overall Time
35 minutes
Authored by Funcockts Ethan Miller


Skill Level Easy

Cuisine American

Makes 12 Portions

Diet Facts Meat-Free

What You Need

Granola Base

01 2 cups old-fashioned rolled oats
02 1/2 cup chopped pecans or walnuts
03 1/4 cup pure maple syrup
04 1/4 cup melted coconut oil
05 1/2 teaspoon ground cinnamon
06 1/4 teaspoon salt

Pumpkin Muffin Filling

01 1 cup pure pumpkin puree
02 1 large egg
03 1/4 cup packed brown sugar
04 1/4 cup plain Greek yogurt
05 1 teaspoon vanilla extract
06 1/2 teaspoon ground cinnamon
07 1/4 teaspoon ground nutmeg
08 1/4 teaspoon ground ginger
09 1/4 teaspoon ground cloves
10 1/2 teaspoon baking powder
11 1/4 teaspoon baking soda
12 1/8 teaspoon salt

Optional Toppings

01 2 tablespoons mini chocolate chips
02 2 tablespoons pumpkin seeds

Directions

Step 01

Prepare Oven and Muffin Tin: Preheat oven to 350°F. Generously grease a 12-cup muffin tin or line with silicone inserts.

Step 02

Mix Granola Base: In a medium mixing bowl, combine oats, chopped nuts, maple syrup, melted coconut oil, cinnamon, and salt. Stir until oats are evenly coated.

Step 03

Form Granola Cups: Divide granola mixture evenly among muffin cups, pressing firmly into bottoms and up the sides to create a cup shape.

Step 04

Bake Granola Shells: Bake granola cups for 10 minutes. Remove from oven and press centers again gently to reinforce cup shape.

Step 05

Prepare Pumpkin Filling: In a separate bowl, whisk together pumpkin puree, egg, brown sugar, Greek yogurt, vanilla extract, cinnamon, nutmeg, ginger, cloves, baking powder, baking soda, and salt until smooth and homogenous.

Step 06

Fill Granola Cups: Spoon about 2 tablespoons of pumpkin mixture into each pre-baked granola shell.

Step 07

Add Toppings: Sprinkle muffin cups with chocolate chips or pumpkin seeds as desired.

Step 08

Final Bake: Return to oven and bake an additional 10 to 12 minutes until filling is set and edges are crisp and golden brown.

Step 09

Cool and Unmold: Allow cups to cool in the pan for 10 minutes before gently extracting. Transfer to a wire rack to cool completely.

Tools Needed

  • 12-cup muffin tin
  • Mixing bowls
  • Whisk
  • Measuring cups and spoons
  • Rubber spatula

Allergy Details

Review all components for allergens and reach out to a health expert if needed.
  • Contains tree nuts if using pecans or walnuts.
  • Egg present in pumpkin mixture.
  • Includes dairy from Greek yogurt.

Nutrition Details (each serving)

Nutrition details are just for reference and can't replace professional medical counsel.
  • Energy (Calories): 160
  • Fats: 7 g
  • Carbohydrates: 22 g
  • Proteins: 3 g